hest.HESTData.ensembl_id_to_gene

hest.HESTData.ensembl_id_to_gene(st: HESTData, filter_na=False) → HESTData

Converts ensemble gene IDs of a HESTData object using Biomart annotations and filter out genes with no matching Ensembl ID

Parameters:

st (HESTData) – HESTData object
filter_na (bool) – whenever to filter genes that are not valid ensemble IDs. Defaults to False.

Returns:

HESTData object with gene names instead of ensemble gene IDs

Return type:

HESTData