Tutorials

This section contains step-by-step guides for using the HEST library:

1. Downloading HEST-1k

Download instructions for HEST-1k.

Step-by-step instructions to download HEST-1k

2. Interacting with HEST-1k

Instructions for how to interact with HEST-1k samples.

Step-by-step instructions to interact HEST-1k

3. Adding new samples to HEST-1k

Instructions for how to add new samples to HEST-1k.

Step-by-step instructions to assemble HEST data

4. HEST-benchmark

Instructions on how to run HEST-Benchmark (install extras with pip install -e “.[benchmark]”).

Overview

5. Batch effect visualization

Tutorial for batch effect visualization.

Batch effect visualization