Index

A | B | C | D | E | F | G | H | I | L | M | P | R | S | T | U | V | W | X

A

auto_read() (hest.readers.Reader method)

autoalign_visium() (in module hest)

B

benchmark() (in module hest.bench)

C

correct_batch_effect() (in module hest.batch_effect)

D

dump_patches() (hest.HESTData.HESTData method)

E

ensembl_id_to_gene() (hest.HESTData.HESTData method)
- (in module hest.HESTData)

F

filter_hest_stromal_housekeeping() (in module hest.batch_effect)

G

H

hest
- module, [1], [2]
hest.bench
- module

I

iter_hest() (in module hest.HESTData)

L

load_wsi() (hest.HESTData.HESTData method)

M

module
- hest, [1], [2]
- hest.bench

P

R

read() (hest.readers.Reader method)

S

T

tiff_save() (in module hest)

U

unify_gene_names() (in module hest.HESTData)

V

VisiumHDReader (class in hest.readers)

VisiumReader (class in hest.readers)

W

write_10X_h5() (in module hest)

write_geojson() (in module hest.io.seg_readers)

X

XeniumParquetCellReader (class in hest.io.seg_readers)